Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino acid dehydrogenase small subunit | FLACOL_00437 | Not Available | Negative | 516170 - 517408 | 46046.2 |
| 4-hydroxyproline epimerase | FLACOL_00438 | Not Available | Negative | 517501 - 518511 | 37321.8 |
| alpha-ketoglutaric semialdehyde dehydrogenase | FLACOL_00439 | Not Available | Negative | 518515 - 520110 | 57596.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | FLACOL_00440 | Not Available | Negative | 520250 - 521185 | 34454.0 |
| hth-type transcriptional activator btr | FLACOL_00441 | Not Available | Positive | 521345 - 522196 | 33073.9 |
| prolyl tri/tetrapeptidyl aminopeptidase precursor | FLACOL_00442 | Not Available | Positive | 522334 - 523611 | 49516.3 |
| l-threonine dehydratase biosynthetic ilva | FLACOL_00443 | Not Available | Negative | 523670 - 524914 | 46207.1 |
| ketol-acid reductoisomerase | FLACOL_00444 | Not Available | Negative | 524901 - 526478 | 58743.3 |
| acetolactate synthase small subunit | FLACOL_00445 | Not Available | Negative | 526447 - 527028 | 22780.6 |
| acetolactate synthase large subunit | FLACOL_00446 | Not Available | Negative | 527039 - 528787 | 64349.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
