Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | FLACOL_00427 | Not Available | Positive | 501678 - 502865 | 43145.8 |
| Trna-trp | Not Available | Not Available | Positive | 502923 - 502997 | Not Available |
| hypothetical protein | FLACOL_00429 | Not Available | Positive | 503217 - 503768 | 20384.8 |
| 50s ribosomal protein l11 | FLACOL_00430 | Not Available | Positive | 503810 - 504271 | 16340.2 |
| 50s ribosomal protein l1 | FLACOL_00431 | Not Available | Positive | 504278 - 504967 | 24403.0 |
| 50s ribosomal protein l10 | FLACOL_00432 | Not Available | Positive | 504993 - 505496 | 18078.9 |
| 50s ribosomal protein l7/l12 | FLACOL_00433 | Not Available | Positive | 505554 - 505922 | 12563.0 |
| dna-directed rna polymerase subunit beta | FLACOL_00434 | Not Available | Positive | 506181 - 509993 | 143009.0 |
| dna-directed rna polymerase subunit beta' | FLACOL_00435 | Not Available | Positive | 510069 - 514373 | 159748.0 |
| hypothetical protein | FLACOL_00436 | Not Available | Positive | 514720 - 515034 | 11710.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
