Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FLACOL_00420 | Not Available | Positive | 495390 - 495611 | 8646.94 |
| helix-hairpin-helix motif protein | FLACOL_00421 | Not Available | Positive | 495614 - 496507 | 34822.9 |
| acyl-coa dehydrogenase | FLACOL_00422 | Not Available | Positive | 496533 - 497702 | 43875.8 |
| protoporphyrinogen oxidase | FLACOL_00423 | Not Available | Positive | 497969 - 499306 | 49007.3 |
| 30s ribosomal protein s21 | FLACOL_00424 | Not Available | Positive | 499613 - 499828 | 8287.27 |
| tyrosine recombinase xerc | FLACOL_00425 | Not Available | Positive | 499918 - 500811 | 34481.4 |
| ribosome hibernation promoting factor hpf | FLACOL_00426 | Not Available | Positive | 500849 - 501151 | 11493.0 |
| Trna-thr | Not Available | Not Available | Positive | 501252 - 501325 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 501393 - 501476 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 501552 - 501623 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
