Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FLACOL_00410 | Not Available | Negative | 482004 - 482201 | 7449.34 |
| octanoyltransferase | FLACOL_00411 | Not Available | Positive | 482611 - 483309 | 26408.8 |
| ribonuclease hii | FLACOL_00412 | Not Available | Negative | 483472 - 484131 | 24637.7 |
| vitamin b12 transporter btub | FLACOL_00413 | Not Available | Positive | 484336 - 487494 | 114203.0 |
| starch-binding associating with outer membrane | FLACOL_00414 | Not Available | Positive | 487505 - 489217 | 64414.5 |
| hypothetical protein | FLACOL_00415 | Not Available | Positive | 489229 - 490134 | 32945.4 |
| hypothetical protein | FLACOL_00416 | Not Available | Positive | 490455 - 492371 | 74885.4 |
| hypothetical protein | FLACOL_00417 | Not Available | Negative | 492310 - 492444 | 5330.49 |
| putative cystathionine beta-synthase | FLACOL_00418 | Not Available | Positive | 492508 - 493869 | 50147.1 |
| hypothetical protein | FLACOL_00419 | Not Available | Positive | 494069 - 495343 | 50685.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
