Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FLACOL_00400 | Not Available | Negative | 473307 - 474098 | 30839.2 |
| free methionine-r-sulfoxide reductase | FLACOL_00401 | Not Available | Negative | 474153 - 474608 | 17038.1 |
| transmembrane exosortase (exosortase_epsh) | FLACOL_00402 | Not Available | Positive | 474684 - 475232 | 21358.7 |
| hypothetical protein | FLACOL_00403 | Not Available | Positive | 475207 - 475659 | 18630.4 |
| hypothetical protein | FLACOL_00404 | Not Available | Positive | 475705 - 476109 | 15081.4 |
| catecholate siderophore receptor cira | FLACOL_00405 | Not Available | Positive | 476175 - 478172 | 76344.9 |
| heavy-metal-associated domain protein | FLACOL_00406 | Not Available | Positive | 478229 - 478567 | 12892.9 |
| carbonic anhydrase precursor | FLACOL_00407 | Not Available | Positive | 479271 - 480149 | 32806.1 |
| hypothetical protein | FLACOL_00408 | Not Available | Positive | 480588 - 481415 | 30327.2 |
| hypothetical protein | FLACOL_00409 | Not Available | Positive | 481426 - 481989 | 22058.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
