Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate--l-alanine ligase | FLACOL_00390 | Not Available | Positive | 461714 - 463054 | 49490.5 |
| cell division protein ftsq | FLACOL_00391 | Not Available | Positive | 463047 - 463769 | 27506.7 |
| cell division protein ftsa | FLACOL_00392 | Not Available | Positive | 463776 - 465152 | 50083.4 |
| cell division protein ftsz | FLACOL_00393 | Not Available | Positive | 465200 - 467263 | 75212.2 |
| glutamyl-trna(gln) amidotransferase subunit e | FLACOL_00394 | Not Available | Positive | 467420 - 467869 | 15904.3 |
| Trna-arg | Not Available | Not Available | Positive | 467958 - 468033 | Not Available |
| rna polymerase sigma factor siga | FLACOL_00396 | Not Available | Negative | 468635 - 469498 | 32834.4 |
| polyribonucleotide nucleotidyltransferase | FLACOL_00397 | Not Available | Negative | 469625 - 471793 | 79664.8 |
| 30s ribosomal protein s15 | FLACOL_00398 | Not Available | Negative | 471951 - 472220 | 10542.8 |
| hypothetical protein | FLACOL_00399 | Not Available | Negative | 472314 - 473243 | 36223.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
