Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferric uptake regulation protein | FLACOL_00380 | Not Available | Negative | 450145 - 450603 | 18093.3 |
| cell division protein mraz | FLACOL_00381 | Not Available | Positive | 451303 - 451806 | 18860.9 |
| ribosomal rna small subunit methyltransferase h | FLACOL_00382 | Not Available | Positive | 451793 - 452689 | 34150.0 |
| hypothetical protein | FLACOL_00383 | Not Available | Positive | 452722 - 453063 | 13247.6 |
| stage v sporulation protein d | FLACOL_00384 | Not Available | Positive | 453054 - 455054 | 74056.4 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--ld- lysine ligase | FLACOL_00385 | Not Available | Positive | 455104 - 456564 | 54394.5 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | FLACOL_00386 | Not Available | Positive | 456642 - 457871 | 45663.1 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | FLACOL_00387 | Not Available | Positive | 457874 - 459205 | 49725.7 |
| lipid ii flippase ftsw | FLACOL_00388 | Not Available | Positive | 459257 - 460552 | 48134.4 |
| udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | FLACOL_00389 | Not Available | Positive | 460555 - 461649 | 40367.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
