Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | FLACOL_00370 | Not Available | Positive | 439765 - 441744 | 75538.7 |
| hypothetical protein | FLACOL_00371 | Not Available | Negative | 441943 - 442884 | 34016.6 |
| putative transcriptional regulator | FLACOL_00372 | Not Available | Negative | 442983 - 443612 | 23838.3 |
| nh(3)-dependent nad(+) synthetase | FLACOL_00373 | Not Available | Negative | 443959 - 444765 | 29831.7 |
| hypothetical protein | FLACOL_00374 | Not Available | Positive | 444789 - 445826 | 41145.2 |
| hypothetical protein | FLACOL_00375 | Not Available | Positive | 445914 - 446249 | 12976.5 |
| hypothetical protein | FLACOL_00376 | Not Available | Positive | 446251 - 446865 | 23317.0 |
| putative gtp-binding protein engb | FLACOL_00377 | Not Available | Negative | 447027 - 447650 | 23701.5 |
| 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase | FLACOL_00378 | Not Available | Negative | 447800 - 448567 | 28865.9 |
| adenylosuccinate synthetase | FLACOL_00379 | Not Available | Negative | 448850 - 450124 | 46978.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
