Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional aspartokinase/homoserine dehydrogenase 1 | FLACOL_00360 | Not Available | Positive | 424430 - 425527 | 40981.2 |
| methionine synthase | FLACOL_00361 | Not Available | Positive | 426344 - 430993 | 173498.0 |
| 5,10-methylenetetrahydrofolate reductase | FLACOL_00362 | Not Available | Positive | 431095 - 432051 | 35860.4 |
| adenosine monophosphate-protein transferase sofic | FLACOL_00363 | Not Available | Negative | 432113 - 433090 | 37828.6 |
| hypothetical protein | FLACOL_00364 | Not Available | Negative | 433601 - 434113 | 20073.6 |
| nucleotidyltransferase domain protein | FLACOL_00365 | Not Available | Negative | 434527 - 434826 | 11507.8 |
| putative abc transporter atp-binding protein yxlf | FLACOL_00366 | Not Available | Negative | 434869 - 435762 | 32818.3 |
| hypothetical protein | FLACOL_00367 | Not Available | Negative | 436053 - 436913 | 31411.6 |
| all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) | FLACOL_00368 | Not Available | Positive | 437028 - 438008 | 37520.3 |
| hypothetical protein | FLACOL_00369 | Not Available | Positive | 438162 - 439400 | 45673.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
