Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide export system permease protein lptg | FLACOL_00340 | Not Available | Negative | 397768 - 398874 | 42136.0 |
| queuine trna-ribosyltransferase | FLACOL_00341 | Not Available | Negative | 398874 - 400004 | 42841.8 |
| transketolase 2 | FLACOL_00342 | Not Available | Positive | 400177 - 401022 | 30532.3 |
| 1-deoxy-d-xylulose-5-phosphate synthase | FLACOL_00343 | Not Available | Positive | 401077 - 402030 | 34015.8 |
| hypothetical protein | FLACOL_00344 | Not Available | Positive | 402803 - 403783 | 38530.5 |
| poly-beta-1,6-n-acetyl-d-glucosamine synthase | FLACOL_00345 | Not Available | Positive | 403844 - 405286 | 54860.4 |
| tetratricopeptide repeat protein | FLACOL_00346 | Not Available | Positive | 405301 - 408066 | 107501.0 |
| hypothetical protein | FLACOL_00347 | Not Available | Positive | 408085 - 410241 | 84411.3 |
| hypothetical protein | FLACOL_00348 | Not Available | Positive | 410222 - 410773 | 21393.4 |
| thioredoxin-dependent 5'-adenylylsulfate reductase | FLACOL_00349 | Not Available | Positive | 411351 - 412046 | 27023.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
