Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase | FLACOL_00330 | Not Available | Positive | 386065 - 386916 | 32712.4 |
| threonine--trna ligase | FLACOL_00331 | Not Available | Positive | 388133 - 390079 | 73690.8 |
| translation initiation factor if-3 | FLACOL_00332 | Not Available | Positive | 390313 - 390654 | 13432.7 |
| 50s ribosomal protein l35 | FLACOL_00333 | Not Available | Positive | 390736 - 390933 | 7439.47 |
| 50s ribosomal protein l20 | FLACOL_00334 | Not Available | Positive | 391094 - 391438 | 13227.6 |
| ribosomal rna large subunit methyltransferase f | FLACOL_00335 | Not Available | Positive | 391488 - 392429 | 35989.5 |
| hypothetical protein | FLACOL_00336 | Not Available | Negative | 392813 - 394075 | 48017.3 |
| replicative dna helicase | FLACOL_00337 | Not Available | Negative | 394124 - 395674 | 57553.7 |
| acetyl-coenzyme a carboxylase carboxyl transferase subunit alpha | FLACOL_00338 | Not Available | Negative | 395828 - 396781 | 35903.5 |
| eama-like transporter family protein | FLACOL_00339 | Not Available | Negative | 396894 - 397781 | 33416.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
