Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FLACOL_00322 | Not Available | Positive | 373620 - 374285 | 24741.6 |
| Trna-ser | Not Available | Not Available | Positive | 374433 - 374520 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 374704 - 374777 | Not Available |
| dihydroneopterin aldolase | FLACOL_00323 | Not Available | Negative | 374835 - 375191 | 13336.2 |
| glutamine--trna ligase | FLACOL_00324 | Not Available | Positive | 375309 - 376997 | 65286.1 |
| modulator of ftsh protease hflk | FLACOL_00325 | Not Available | Negative | 377275 - 378255 | 36748.2 |
| glutamate--trna ligase | FLACOL_00326 | Not Available | Negative | 378538 - 380121 | 60790.9 |
| hypothetical protein | FLACOL_00327 | Not Available | Positive | 380212 - 383565 | 128540.0 |
| endoribonuclease ybey | FLACOL_00328 | Not Available | Positive | 383552 - 383977 | 17039.0 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme mnmg | FLACOL_00329 | Not Available | Positive | 384103 - 385974 | 70172.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
