Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-oxo-6-deoxy-d-allose reductase | FLACOL_00302 | Not Available | Positive | 349739 - 350716 | 36612.4 |
| hypothetical protein | FLACOL_00303 | Not Available | Negative | 350721 - 351110 | 15285.9 |
| allantoinase | FLACOL_00304 | Not Available | Negative | 351121 - 352458 | 50357.9 |
| undecaprenyl-phosphate mannosyltransferase | FLACOL_00305 | Not Available | Negative | 352477 - 353202 | 27712.7 |
| hypothetical protein | FLACOL_00306 | Not Available | Positive | 353305 - 353970 | 26583.3 |
| uroporphyrinogen-iii synthase | FLACOL_00307 | Not Available | Positive | 354003 - 354752 | 28762.6 |
| putative polyketide biosynthesis enoyl-coa hydratase pksh | FLACOL_00308 | Not Available | Positive | 354839 - 355591 | 27318.8 |
| hypothetical protein | FLACOL_00309 | Not Available | Positive | 357016 - 357312 | 11340.7 |
| hypothetical protein | FLACOL_00310 | Not Available | Negative | 357353 - 358492 | 44639.6 |
| hypothetical protein | FLACOL_00311 | Not Available | Negative | 358613 - 359662 | 41458.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
