Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 330986 - 331075 | Not Available |
| streptolysin o precursor | FLACOL_00293 | Not Available | Negative | 332207 - 333883 | 60901.4 |
| geranylgeranylglyceryl phosphate synthase-like protein | FLACOL_00294 | Not Available | Negative | 334919 - 335635 | 26222.2 |
| holo-(acyl carrier protein) synthase 2 | FLACOL_00295 | Not Available | Negative | 335749 - 336414 | 26174.7 |
| adenosylhomocysteinase | FLACOL_00296 | Not Available | Positive | 336643 - 337959 | 48068.7 |
| nicotinamide mononucleotide transporter | FLACOL_00297 | Not Available | Positive | 338390 - 339022 | 25039.6 |
| trifunctional nad biosynthesis/regulator protein nadr | FLACOL_00298 | Not Available | Positive | 338977 - 341082 | 81114.7 |
| prolyl tripeptidyl peptidase precursor | FLACOL_00299 | Not Available | Negative | 341506 - 343422 | 72664.9 |
| exoglucanase b precursor | FLACOL_00300 | Not Available | Negative | 343518 - 346745 | 113099.0 |
| tyrosine--trna ligase 1 | FLACOL_00301 | Not Available | Negative | 346951 - 348261 | 49093.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
