Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane transport permease ybhs | FLACOL_00282 | Not Available | Positive | 321690 - 322859 | 44707.7 |
| dna-binding transcriptional dual regulator crp | FLACOL_00283 | Not Available | Positive | 322956 - 323516 | 21873.3 |
| 6-pyruvoyl tetrahydropterin synthase | FLACOL_00284 | Not Available | Negative | 323603 - 324055 | 17180.5 |
| 50s ribosomal protein l27 | FLACOL_00285 | Not Available | Negative | 324133 - 324393 | 9267.12 |
| 50s ribosomal protein l21 | FLACOL_00286 | Not Available | Negative | 324419 - 324847 | 15585.8 |
| protease 3 precursor | FLACOL_00287 | Not Available | Positive | 325039 - 326340 | 50059.9 |
| peptidase m16 inactive domain protein | FLACOL_00288 | Not Available | Positive | 326337 - 327689 | 51022.4 |
| putative deoxyribonuclease ycfh | FLACOL_00289 | Not Available | Positive | 327939 - 328709 | 29441.5 |
| acyltransferase | FLACOL_00290 | Not Available | Positive | 328824 - 329960 | 43947.8 |
| l-asparaginase 1 | FLACOL_00291 | Not Available | Positive | 329944 - 330978 | 38077.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
