Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit c 1 | FLACOL_00272 | Not Available | Negative | 313085 - 313606 | 20378.5 |
| nadh-quinone oxidoreductase subunit 6 | FLACOL_00273 | Not Available | Negative | 313608 - 314159 | 20078.3 |
| nad(p)h-quinone oxidoreductase subunit 3 | FLACOL_00274 | Not Available | Negative | 314240 - 314605 | 13771.3 |
| ribonuclease g | FLACOL_00275 | Not Available | Negative | 314761 - 316353 | 60237.9 |
| dna-binding protein hu | FLACOL_00276 | Not Available | Negative | 316647 - 316955 | 11223.6 |
| putative a/g-specific adenine glycosylase yfhq | FLACOL_00277 | Not Available | Positive | 317087 - 318118 | 40328.3 |
| single-stranded dna-binding protein | FLACOL_00278 | Not Available | Positive | 318161 - 318583 | 15963.8 |
| hypothetical protein | FLACOL_00279 | Not Available | Positive | 318661 - 319149 | 19016.6 |
| outer membrane efflux protein | FLACOL_00280 | Not Available | Positive | 319289 - 320695 | 52513.7 |
| putative efflux pump membrane fusion protein | FLACOL_00281 | Not Available | Positive | 320712 - 321671 | 35400.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
