Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alternative cytochrome c oxidase subunit 2 | FLACOL_00252 | Not Available | Negative | 290711 - 291889 | 43774.3 |
| hypothetical protein | FLACOL_00253 | Not Available | Negative | 291909 - 293390 | 56432.3 |
| cytochrome c | FLACOL_00254 | Not Available | Negative | 293410 - 293958 | 20377.4 |
| hypothetical protein | FLACOL_00255 | Not Available | Negative | 293966 - 294490 | 19779.8 |
| polysulfide reductase, nrfd | FLACOL_00256 | Not Available | Negative | 294497 - 295903 | 53630.6 |
| tetrathionate reductase subunit b precursor | FLACOL_00257 | Not Available | Negative | 295930 - 298956 | 110244.0 |
| cytochrome c-554(547) | FLACOL_00258 | Not Available | Negative | 298990 - 300324 | 48484.1 |
| hypothetical protein | FLACOL_00259 | Not Available | Positive | 300541 - 300930 | 15415.7 |
| nadh-quinone oxidoreductase subunit n | FLACOL_00260 | Not Available | Negative | 301003 - 302376 | 50275.7 |
| nadh-quinone oxidoreductase subunit m | FLACOL_00261 | Not Available | Negative | 302438 - 303880 | 53627.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
