Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FLACOL_00242 | Not Available | Positive | 282887 - 283474 | 22890.9 |
| hypothetical protein | FLACOL_00243 | Not Available | Positive | 283691 - 284086 | 14665.0 |
| hypothetical protein | FLACOL_00244 | Not Available | Positive | 284108 - 284515 | 15889.9 |
| putative deoxyribonuclease rhsc | FLACOL_00245 | Not Available | Positive | 284938 - 285738 | 30993.7 |
| hypothetical protein | FLACOL_00246 | Not Available | Positive | 285745 - 286050 | 11726.3 |
| putative deoxyribonuclease rhsc | FLACOL_00247 | Not Available | Positive | 286083 - 286763 | 25682.3 |
| hypothetical protein | FLACOL_00248 | Not Available | Positive | 286766 - 287119 | 14230.7 |
| hypothetical protein | FLACOL_00249 | Not Available | Positive | 287451 - 288056 | 23621.0 |
| hypothetical protein | FLACOL_00250 | Not Available | Negative | 288100 - 288780 | 26592.8 |
| alternative cytochrome c oxidase subunit 1 | FLACOL_00251 | Not Available | Negative | 288876 - 290678 | 66951.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
