Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FLACOL_02727 | Not Available | Positive | 3200634 - 3200990 | 14079.1 |
| hypothetical protein | FLACOL_02728 | Not Available | Positive | 3201434 - 3201877 | 17446.1 |
| hypothetical protein | FLACOL_02729 | Not Available | Negative | 3201872 - 3202063 | 7651.13 |
| hypothetical protein | FLACOL_02730 | Not Available | Negative | 3202067 - 3202507 | 17234.6 |
| toxin rtx-i translocation atp-binding protein | FLACOL_02731 | Not Available | Negative | 3203166 - 3205385 | 84871.3 |
| hypothetical protein | FLACOL_02732 | Not Available | Negative | 3205363 - 3206691 | 51978.2 |
| hypothetical protein | FLACOL_02733 | Not Available | Negative | 3206790 - 3207026 | 8411.02 |
| hypothetical protein | FLACOL_02734 | Not Available | Negative | 3207209 - 3207433 | 7803.18 |
| hypothetical protein | FLACOL_02735 | Not Available | Negative | 3207567 - 3207839 | 10721.8 |
| hypothetical protein | FLACOL_02736 | Not Available | Negative | 3207906 - 3209975 | 78653.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
