Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate kinase | FLACOL_02717 | Not Available | Positive | 3186970 - 3189084 | 81890.4 |
| exopolyphosphatase | FLACOL_02718 | Not Available | Positive | 3189095 - 3189985 | 33523.9 |
| fe(3+) dicitrate transport protein feca precursor | FLACOL_02719 | Not Available | Negative | 3190301 - 3192724 | 91299.3 |
| vitamin k-dependent gamma-carboxylase | FLACOL_02720 | Not Available | Negative | 3192705 - 3194072 | 53886.6 |
| imelysin | FLACOL_02721 | Not Available | Negative | 3194050 - 3195162 | 42088.6 |
| hypothetical protein | FLACOL_02722 | Not Available | Negative | 3195248 - 3196444 | 43751.6 |
| hydroxymethylglutaryl-coa lyase yngg | FLACOL_02723 | Not Available | Negative | 3196559 - 3197431 | 32437.8 |
| dihydroorotate dehydrogenase (quinone) | FLACOL_02724 | Not Available | Negative | 3197450 - 3198493 | 38683.9 |
| ribosomal rna large subunit methyltransferase h | FLACOL_02725 | Not Available | Positive | 3198588 - 3199061 | 18126.2 |
| hypothetical protein | FLACOL_02726 | Not Available | Negative | 3200329 - 3200523 | 7646.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
