Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna threonylcarbamoyladenosine dehydratase | FLACOL_02707 | Not Available | Negative | 3176084 - 3176800 | 26171.1 |
| putative deoxyribonuclease ycfh | FLACOL_02708 | Not Available | Negative | 3176825 - 3177460 | 24754.3 |
| putative 3-hydroxyphenylpropionic transporter mhpt | FLACOL_02709 | Not Available | Positive | 3178051 - 3179274 | 46449.8 |
| penicillinase repressor | FLACOL_02710 | Not Available | Positive | 3179391 - 3179750 | 14309.2 |
| blar1 peptidase m56 | FLACOL_02711 | Not Available | Positive | 3179753 - 3181606 | 72339.4 |
| hypothetical protein | FLACOL_02712 | Not Available | Positive | 3182459 - 3182686 | 8355.1 |
| hypothetical protein | FLACOL_02713 | Not Available | Positive | 3183329 - 3183436 | 4087.27 |
| dtdp-3-amino-3,6-dideoxy-alpha-d- galactopyranose transaminase | FLACOL_02714 | Not Available | Negative | 3183601 - 3184713 | 42002.4 |
| hypothetical protein | FLACOL_02715 | Not Available | Negative | 3184762 - 3185700 | 37036.1 |
| 23s rrna (uridine(2479)-2'-o)-methyltransferase | FLACOL_02716 | Not Available | Positive | 3185808 - 3186593 | 28887.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
