Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier-protein] reductase fabg | FLACOL_02687 | Not Available | Negative | 3151104 - 3151850 | 26207.7 |
| cytochrome c551 peroxidase precursor | FLACOL_02688 | Not Available | Positive | 3152011 - 3153204 | 43391.8 |
| hypothetical protein | FLACOL_02689 | Not Available | Negative | 3153461 - 3153955 | 19808.9 |
| putative neutral zinc metallopeptidase | FLACOL_02690 | Not Available | Negative | 3154804 - 3155661 | 31655.4 |
| autoinducer 2 sensor kinase/phosphatase luxq | FLACOL_02691 | Not Available | Negative | 3155666 - 3159646 | 155531.0 |
| hypothetical protein | FLACOL_02692 | Not Available | Negative | 3159729 - 3160955 | 47187.2 |
| pp_02649 | FLACOL_02693 | Not Available | Positive | 3160966 - 3161610 | Not Available |
| hypothetical protein | FLACOL_02694 | Not Available | Positive | 3161678 - 3162478 | 28657.6 |
| atp-dependent rna helicase rhle | FLACOL_02695 | Not Available | Negative | 3162668 - 3163951 | 48508.6 |
| formimidoylglutamase | FLACOL_02696 | Not Available | Negative | 3163976 - 3165016 | 38994.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
