Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1d-myo-inositol 2-acetamido-2-deoxy-alpha-d-glucopyranoside deacetylase | FLACOL_02677 | Not Available | Negative | 3137992 - 3138708 | 26994.4 |
| salicylate biosynthesis isochorismate synthase | FLACOL_02678 | Not Available | Negative | 3138739 - 3139806 | 41346.8 |
| esterase ydii | FLACOL_02679 | Not Available | Negative | 3139854 - 3140303 | 16683.5 |
| hypothetical protein | FLACOL_02680 | Not Available | Positive | 3140398 - 3141930 | 57603.1 |
| microcin c7 self-immunity protein mccf | FLACOL_02681 | Not Available | Positive | 3142733 - 3143776 | 39385.9 |
| enterobactin exporter ents | FLACOL_02682 | Not Available | Negative | 3144025 - 3145275 | 45455.9 |
| putative abc transporter atp-binding protein yxlf | FLACOL_02683 | Not Available | Negative | 3145277 - 3145957 | 26029.8 |
| sensory transduction protein lytr | FLACOL_02684 | Not Available | Negative | 3146833 - 3147588 | 29649.8 |
| hypothetical protein | FLACOL_02685 | Not Available | Positive | 3147948 - 3148706 | 29062.2 |
| hypothetical protein | FLACOL_02686 | Not Available | Negative | 3148957 - 3150984 | 78385.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
