Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | FLACOL_00232 | Not Available | Positive | 272751 - 275165 | 92233.4 |
| tyrosine recombinase xerd | FLACOL_00233 | Not Available | Positive | 275289 - 276155 | 33965.5 |
| tyrosine recombinase xerd | FLACOL_00234 | Not Available | Positive | 276216 - 277031 | 32262.4 |
| hypothetical protein | FLACOL_00235 | Not Available | Positive | 277085 - 277279 | 7546.03 |
| hypothetical protein | FLACOL_00236 | Not Available | Positive | 277421 - 278155 | 27572.8 |
| hypothetical protein | FLACOL_00237 | Not Available | Positive | 279298 - 279834 | 19455.2 |
| hypothetical protein | FLACOL_00238 | Not Available | Positive | 279838 - 280146 | 12320.2 |
| integrase core domain protein | FLACOL_00239 | Not Available | Negative | 280323 - 281597 | 50107.2 |
| putative deoxyribonuclease rhsc | FLACOL_00240 | Not Available | Positive | 281934 - 282578 | 23659.7 |
| hypothetical protein | FLACOL_00241 | Not Available | Positive | 282583 - 282894 | 12114.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
