Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan o-acetyltransferase | FLACOL_02667 | Not Available | Positive | 3127794 - 3129275 | 57780.5 |
| hypothetical protein | FLACOL_02668 | Not Available | Negative | 3129603 - 3130853 | 47524.0 |
| flagellar rod assembly protein/muramidase flgj | FLACOL_02669 | Not Available | Positive | 3131023 - 3131475 | 17586.3 |
| endonuclease muts2 | FLACOL_02670 | Not Available | Positive | 3131573 - 3133741 | 83327.7 |
| hypothetical protein | FLACOL_02671 | Not Available | Positive | 3133753 - 3134166 | 16316.1 |
| hypothetical protein | FLACOL_02672 | Not Available | Positive | 3134176 - 3135249 | 42547.9 |
| ribulose-phosphate 3-epimerase | FLACOL_02673 | Not Available | Negative | 3135680 - 3136342 | 24090.4 |
| acyl-protein synthetase, luxe | FLACOL_02674 | Not Available | Negative | 3136422 - 3137402 | 37153.7 |
| Trna-his | Not Available | Not Available | Positive | 3137718 - 3137794 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 3137829 - 3137905 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
