Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2og-fe(ii) oxygenase superfamily protein | FLACOL_02657 | Not Available | Positive | 3119642 - 3120676 | 39117.2 |
| translation initiation factor sui1 | FLACOL_02658 | Not Available | Positive | 3120755 - 3121084 | 12538.2 |
| purine nucleoside phosphorylase deod-type | FLACOL_02659 | Not Available | Positive | 3121243 - 3122109 | 32193.7 |
| anhydro-n-acetylmuramic acid kinase | FLACOL_02660 | Not Available | Positive | 3122129 - 3122650 | 20889.9 |
| hypothetical protein | FLACOL_02661 | Not Available | Positive | 3122661 - 3123263 | 23847.7 |
| hypothetical protein | FLACOL_02662 | Not Available | Positive | 3123256 - 3123792 | 21038.0 |
| hypothetical protein | FLACOL_02663 | Not Available | Positive | 3123830 - 3124675 | 32379.8 |
| hypothetical protein | FLACOL_02664 | Not Available | Positive | 3124693 - 3125640 | 36931.0 |
| uracil-dna glycosylase | FLACOL_02665 | Not Available | Negative | 3125643 - 3126308 | 25343.3 |
| hypothetical protein | FLACOL_02666 | Not Available | Positive | 3126397 - 3127785 | 53568.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
