Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ecf rna polymerase sigma-e factor | FLACOL_02647 | Not Available | Positive | 3109187 - 3109729 | 21260.7 |
| hypothetical protein | FLACOL_02648 | Not Available | Positive | 3109760 - 3110146 | 14963.7 |
| hypothetical protein | FLACOL_02649 | Not Available | Positive | 3110165 - 3110608 | 17619.7 |
| putative cysteine desulfurase | FLACOL_02650 | Not Available | Positive | 3110792 - 3112276 | 55865.5 |
| nte family protein rssa | FLACOL_02651 | Not Available | Negative | 3112509 - 3113279 | 28619.5 |
| 26 kda periplasmic immunogenic protein precursor | FLACOL_02652 | Not Available | Negative | 3113418 - 3114116 | 26133.8 |
| rhomboid protease glup | FLACOL_02653 | Not Available | Negative | 3114174 - 3114815 | 24068.1 |
| lipid a biosynthesis lauroyl acyltransferase | FLACOL_02654 | Not Available | Positive | 3114922 - 3115791 | 34823.0 |
| cytosol non-specific dipeptidase | FLACOL_02655 | Not Available | Negative | 3115946 - 3117406 | 53209.8 |
| 2-oxoisovalerate dehydrogenase subunit beta | FLACOL_02656 | Not Available | Negative | 3117574 - 3119550 | 74249.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
