Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolipoprotein diacylglyceryl transferase | FLACOL_02627 | Not Available | Positive | 3086565 - 3087290 | 27926.2 |
| antilisterial bacteriocin subtilosin biosynthesis protein alba | FLACOL_02628 | Not Available | Positive | 3087280 - 3088665 | 53038.7 |
| hypothetical protein | FLACOL_02629 | Not Available | Positive | 3088711 - 3088980 | 10057.2 |
| hypothetical protein | FLACOL_02630 | Not Available | Positive | 3088986 - 3089189 | 7593.01 |
| hypothetical protein | FLACOL_02631 | Not Available | Positive | 3089259 - 3090644 | 54824.5 |
| aminopeptidase n | FLACOL_02632 | Not Available | Positive | 3090837 - 3092951 | 82540.4 |
| bestrophin, rfp-tm, chloride channel | FLACOL_02633 | Not Available | Negative | 3092972 - 3093832 | 33566.1 |
| potassium transport protein kup | FLACOL_02634 | Not Available | Negative | 3093839 - 3095815 | 74555.0 |
| ycf48-like protein | FLACOL_02635 | Not Available | Positive | 3095914 - 3096963 | 39187.2 |
| hypothetical protein | FLACOL_02636 | Not Available | Negative | 3096968 - 3097276 | 12151.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
