Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aminopeptidase ysdc | FLACOL_02617 | Not Available | Positive | 3067767 - 3068855 | 40474.5 |
| pregnancy-associated plasma protein-a | FLACOL_02618 | Not Available | Negative | 3069257 - 3070567 | 50487.2 |
| kynurenine formamidase | FLACOL_02619 | Not Available | Negative | 3071297 - 3072109 | 31321.4 |
| hypothetical protein | FLACOL_02620 | Not Available | Negative | 3072336 - 3073727 | 53997.8 |
| hypothetical protein | FLACOL_02621 | Not Available | Negative | 3074715 - 3076103 | 53568.1 |
| hypothetical protein | FLACOL_02622 | Not Available | Positive | 3077809 - 3080202 | 91486.7 |
| hypothetical protein | FLACOL_02623 | Not Available | Positive | 3080877 - 3081323 | 17511.3 |
| atp-dependent dna helicase recg | FLACOL_02624 | Not Available | Negative | 3081335 - 3083437 | 80424.5 |
| atp-binding region | FLACOL_02625 | Not Available | Negative | 3083467 - 3084207 | 28541.1 |
| putative abc transporter atp-binding protein yhes | FLACOL_02626 | Not Available | Negative | 3084843 - 3086462 | 61254.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
