Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine dehydrogenase | FLACOL_02597 | Not Available | Positive | 3042775 - 3043878 | 39848.6 |
| hypothetical protein | FLACOL_02598 | Not Available | Positive | 3044056 - 3044964 | 35732.1 |
| hypothetical protein | FLACOL_02599 | Not Available | Positive | 3044972 - 3045460 | 18188.9 |
| preprotein translocase subunit yajc | FLACOL_02600 | Not Available | Positive | 3045516 - 3045779 | 9793.34 |
| hypothetical protein | FLACOL_02601 | Not Available | Negative | 3046589 - 3047236 | 25351.7 |
| ecf rna polymerase sigma-e factor | FLACOL_02602 | Not Available | Negative | 3047250 - 3047744 | 19585.3 |
| hypothetical protein | FLACOL_02603 | Not Available | Negative | 3048386 - 3052840 | 163407.0 |
| hypothetical protein | FLACOL_02604 | Not Available | Negative | 3052875 - 3055154 | 85809.4 |
| nicotinate-nucleotide pyrophosphorylase | FLACOL_02605 | Not Available | Positive | 3055568 - 3056425 | 31595.4 |
| ribonuclease bn/unknown domain fusion protein | FLACOL_02606 | Not Available | Positive | 3056480 - 3057406 | 35028.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
