Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase 2 | FLACOL_00222 | Not Available | Negative | 265283 - 265918 | 24056.8 |
| carbonic anhydrase 2 | FLACOL_00223 | Not Available | Negative | 265921 - 266598 | 25189.5 |
| c4-dicarboxylic acid transporter daua | FLACOL_00224 | Not Available | Negative | 266605 - 268206 | 57110.9 |
| hypothetical protein | FLACOL_00225 | Not Available | Negative | 268270 - 268572 | 11998.7 |
| hypothetical protein | FLACOL_00226 | Not Available | Positive | 269280 - 269555 | 10008.0 |
| hypothetical protein | FLACOL_00227 | Not Available | Positive | 269565 - 269942 | 14805.3 |
| hypothetical protein | FLACOL_00228 | Not Available | Negative | 269982 - 270128 | 5932.44 |
| hypothetical protein | FLACOL_00229 | Not Available | Negative | 270141 - 271352 | 47056.7 |
| hypothetical protein | FLACOL_00230 | Not Available | Negative | 271540 - 272226 | 26897.4 |
| hth-type transcriptional regulator immr | FLACOL_00231 | Not Available | Negative | 272261 - 272593 | 12407.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
