Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exostosin family protein | FLACOL_02567 | Not Available | Positive | 3002320 - 3003327 | 39523.8 |
| putative glycosyl transferase | FLACOL_02568 | Not Available | Positive | 3003336 - 3004325 | 38452.4 |
| udp-d-galactose:(glucosyl)lipopolysaccharide-1, 6-d-galactosyltransferase | FLACOL_02569 | Not Available | Positive | 3004337 - 3005470 | 43850.1 |
| hypothetical protein | FLACOL_02570 | Not Available | Positive | 3005480 - 3006481 | 38653.9 |
| putative poly(glycerol-phosphate) alpha-glucosyltransferase | FLACOL_02571 | Not Available | Positive | 3006472 - 3007554 | 41748.2 |
| o-antigen ligase | FLACOL_02572 | Not Available | Positive | 3007535 - 3008893 | 52005.8 |
| glycogen synthase | FLACOL_02573 | Not Available | Positive | 3008862 - 3009875 | 38838.4 |
| udp-n-acetylgalactosamine-undecaprenyl- phosphate n-acetylgalactosaminephosphotransferase | FLACOL_02574 | Not Available | Positive | 3010207 - 3011598 | 54082.6 |
| hypothetical protein | FLACOL_02575 | Not Available | Negative | 3011780 - 3012901 | 43735.9 |
| hypothetical protein | FLACOL_02576 | Not Available | Negative | 3012958 - 3014073 | 41809.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
