Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-dihydroxy-2-naphthoyl-coa synthase | FLACOL_02517 | Not Available | Positive | 2945810 - 2946649 | 31145.2 |
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | FLACOL_02518 | Not Available | Positive | 2946949 - 2947863 | 34139.3 |
| hypothetical protein | FLACOL_02519 | Not Available | Positive | 2947863 - 2948645 | 30321.5 |
| hypothetical protein | FLACOL_02520 | Not Available | Positive | 2948740 - 2949984 | 48186.9 |
| l-ala-d/l-glu epimerase | FLACOL_02521 | Not Available | Positive | 2950007 - 2951068 | 40359.9 |
| putative membrane protein insertion efficiency factor | FLACOL_02522 | Not Available | Negative | 2951113 - 2951400 | 10969.7 |
| cysteine--trna ligase | FLACOL_02523 | Not Available | Negative | 2951536 - 2953017 | 56571.4 |
| gtp cyclohydrolase 1 | FLACOL_02524 | Not Available | Negative | 2953092 - 2953763 | 25046.8 |
| aspartate aminotransferase | FLACOL_02525 | Not Available | Negative | 2953838 - 2955031 | 43965.0 |
| hypothetical protein | FLACOL_02526 | Not Available | Positive | 2955719 - 2957404 | 60109.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
