Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FLACOL_02507 | Not Available | Positive | 2937732 - 2937950 | 8530.41 |
| hexameric tyrosine-coordinated heme protein (hthp) | FLACOL_02508 | Not Available | Negative | 2938092 - 2938325 | 8616.63 |
| transcriptional activator ftrb | FLACOL_02509 | Not Available | Negative | 2938388 - 2938969 | 22294.3 |
| putative gtpase argk | FLACOL_02510 | Not Available | Positive | 2939077 - 2940165 | 40014.1 |
| hypothetical protein | FLACOL_02511 | Not Available | Negative | 2940336 - 2940584 | 9872.15 |
| hypothetical protein | FLACOL_02512 | Not Available | Positive | 2941228 - 2942055 | 31027.1 |
| hypothetical protein | FLACOL_02513 | Not Available | Positive | 2942319 - 2942465 | 5517.68 |
| peptidase t | FLACOL_02514 | Not Available | Negative | 2942538 - 2943779 | 46439.0 |
| 37-kd nucleoid-associated bacterial protein | FLACOL_02515 | Not Available | Negative | 2943782 - 2944840 | 41714.2 |
| plasmid pria4b orf-3-like protein | FLACOL_02516 | Not Available | Negative | 2944931 - 2945467 | 20752.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
