Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i restriction enzyme ecoki subunit r | FLACOL_02497 | Not Available | Positive | 2922398 - 2923933 | 59514.0 |
| putative lumazine-binding protein | FLACOL_02498 | Not Available | Positive | 2924248 - 2924700 | 17706.6 |
| hypothetical protein | FLACOL_02499 | Not Available | Positive | 2924926 - 2926218 | 48615.7 |
| hypothetical protein | FLACOL_02500 | Not Available | Positive | 2926611 - 2927015 | 15439.4 |
| hypothetical protein | FLACOL_02501 | Not Available | Negative | 2927291 - 2929390 | 79712.7 |
| autoinducer 2 sensor kinase/phosphatase luxq | FLACOL_02502 | Not Available | Negative | 2929674 - 2931860 | 83839.0 |
| hypothetical protein | FLACOL_02503 | Not Available | Positive | 2931975 - 2932739 | 29980.0 |
| eama-like transporter family protein | FLACOL_02504 | Not Available | Positive | 2933426 - 2934316 | 32092.7 |
| 2og-fe(ii) oxygenase superfamily protein | FLACOL_02505 | Not Available | Positive | 2935303 - 2935899 | 23218.0 |
| putative fad-linked oxidoreductase | FLACOL_02506 | Not Available | Negative | 2936149 - 2937552 | 51504.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
