Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FLACOL_02407 | Not Available | Positive | 2826777 - 2827481 | 27422.7 |
| hypothetical protein | FLACOL_02408 | Not Available | Positive | 2827551 - 2828309 | 29680.2 |
| hypothetical protein | FLACOL_02409 | Not Available | Negative | 2828978 - 2829550 | 22025.4 |
| lipoteichoic acid synthase 1 | FLACOL_02410 | Not Available | Negative | 2829550 - 2831472 | 74653.2 |
| l-serine dehydratase 1 | FLACOL_02411 | Not Available | Positive | 2831595 - 2833019 | 52352.9 |
| hopj type iii effector protein | FLACOL_02412 | Not Available | Positive | 2833205 - 2833537 | 12842.4 |
| single-stranded-dna-specific exonuclease recj | FLACOL_02413 | Not Available | Positive | 2833668 - 2835356 | 63457.4 |
| hypothetical protein | FLACOL_02414 | Not Available | Positive | 2835761 - 2837104 | 50621.1 |
| bacterial sh3 domain protein | FLACOL_02415 | Not Available | Positive | 2837117 - 2838229 | 43113.0 |
| phage lysozyme | FLACOL_02416 | Not Available | Positive | 2838558 - 2840453 | 71347.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
