Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane efflux protein | FLACOL_02387 | Not Available | Positive | 2804864 - 2806183 | 49695.5 |
| multidrug export protein emra | FLACOL_02388 | Not Available | Positive | 2806193 - 2807278 | 39550.2 |
| multidrug export protein emrb | FLACOL_02389 | Not Available | Positive | 2807289 - 2808872 | 58967.0 |
| 2-dehydro-3-deoxyphosphooctonate aldolase | FLACOL_02390 | Not Available | Positive | 2809017 - 2809835 | 30235.8 |
| ribosomal large subunit pseudouridine synthase f | FLACOL_02391 | Not Available | Negative | 2810274 - 2811029 | 28896.3 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | FLACOL_02392 | Not Available | Negative | 2811164 - 2812039 | 33570.9 |
| chromosome partition protein smc | FLACOL_02393 | Not Available | Negative | 2812039 - 2812815 | 29924.9 |
| putative gtp cyclohydrolase 1 type 2 | FLACOL_02394 | Not Available | Negative | 2812820 - 2813935 | 41842.6 |
| tetraacyldisaccharide 4'-kinase | FLACOL_02395 | Not Available | Positive | 2814256 - 2815287 | 39537.4 |
| purine nucleoside phosphorylase 1 | FLACOL_02396 | Not Available | Positive | 2815259 - 2816071 | 30295.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
