Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-(3-hydroxyphenyl)propionate hydroxylase | FLACOL_00202 | Not Available | Positive | 241952 - 243208 | 47107.2 |
| hypothetical protein | FLACOL_00203 | Not Available | Negative | 243244 - 243993 | 28907.9 |
| cobalt-zinc-cadmium resistance protein czca | FLACOL_00204 | Not Available | Negative | 244258 - 247356 | 114688.0 |
| carbohydrate-selective porin, oprb family | FLACOL_00205 | Not Available | Negative | 247367 - 248707 | 50225.3 |
| cobalt-zinc-cadmium resistance protein czcb | FLACOL_00206 | Not Available | Negative | 248707 - 249798 | 40936.2 |
| cobalt-zinc-cadmium resistance protein czcc precursor | FLACOL_00207 | Not Available | Negative | 249804 - 251060 | 47897.9 |
| hypothetical protein | FLACOL_00208 | Not Available | Negative | 251124 - 251891 | 30284.1 |
| c4-dicarboxylic acid transporter daua | FLACOL_00209 | Not Available | Negative | 251922 - 253535 | 57610.2 |
| nadh-quinone oxidoreductase subunit l | FLACOL_00210 | Not Available | Negative | 253555 - 255426 | 71873.8 |
| hypothetical protein | FLACOL_00211 | Not Available | Negative | 255441 - 257930 | 95381.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
