Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein | FLACOL_02357 | Not Available | Positive | 2763386 - 2763718 | 12722.3 |
| hypothetical protein | FLACOL_02358 | Not Available | Negative | 2763866 - 2764726 | 32821.8 |
| crispr-associated endonuclease cas9 | FLACOL_02359 | Not Available | Negative | 2766356 - 2770738 | 172931.0 |
| gh3 auxin-responsive promoter | FLACOL_02360 | Not Available | Negative | 2770907 - 2772388 | 56764.4 |
| hypothetical protein | FLACOL_02361 | Not Available | Negative | 2772388 - 2772870 | 18464.4 |
| sec-independent protein translocase protein tatay | FLACOL_02362 | Not Available | Positive | 2773019 - 2773195 | 6244.79 |
| diguanylate cyclase | FLACOL_02363 | Not Available | Positive | 2774846 - 2775802 | 36696.2 |
| hypothetical protein | FLACOL_02364 | Not Available | Positive | 2775806 - 2777266 | 56456.9 |
| hypothetical protein | FLACOL_02365 | Not Available | Positive | 2777581 - 2780076 | 90403.8 |
| general stress protein 13 | FLACOL_02366 | Not Available | Negative | 2780168 - 2782291 | 79468.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
