Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FLACOL_02347 | Not Available | Positive | 2749899 - 2750051 | 5518.69 |
| prolyl endopeptidase precursor | FLACOL_02348 | Not Available | Positive | 2750131 - 2752281 | 82616.7 |
| hypothetical protein | FLACOL_02349 | Not Available | Positive | 2752382 - 2755480 | 119761.0 |
| hypothetical protein | FLACOL_02350 | Not Available | Negative | 2755820 - 2756920 | 41231.0 |
| sporulation related domain protein | FLACOL_02351 | Not Available | Positive | 2757128 - 2758087 | 36469.7 |
| putative acyl-coa thioester hydrolase | FLACOL_02352 | Not Available | Positive | 2758304 - 2758816 | 18890.7 |
| prolyl endopeptidase | FLACOL_02353 | Not Available | Negative | 2758865 - 2760808 | 73247.5 |
| putative inner membrane transporter yeda | FLACOL_02354 | Not Available | Negative | 2760859 - 2761761 | 33428.1 |
| hypothetical protein | FLACOL_02355 | Not Available | Negative | 2761761 - 2762591 | 30925.7 |
| hypothetical protein | FLACOL_02356 | Not Available | Negative | 2762595 - 2762942 | 13826.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
