Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease | FLACOL_02327 | Not Available | Negative | 2724424 - 2725323 | 34576.8 |
| hypothetical protein | FLACOL_02328 | Not Available | Negative | 2725381 - 2726304 | 35235.6 |
| hypothetical protein | FLACOL_02329 | Not Available | Negative | 2726261 - 2726845 | 22141.0 |
| hypothetical protein | FLACOL_02330 | Not Available | Negative | 2726867 - 2730511 | 140873.0 |
| hypothetical protein | FLACOL_02331 | Not Available | Negative | 2730915 - 2731865 | 37158.8 |
| hypothetical protein | FLACOL_02332 | Not Available | Negative | 2731862 - 2732365 | 19710.7 |
| glycosyl transferases group 1 | FLACOL_02333 | Not Available | Positive | 2732473 - 2733423 | 37431.8 |
| threonylcarbamoyl-amp synthase | FLACOL_02334 | Not Available | Positive | 2733426 - 2733992 | 21197.0 |
| multifunctional cca protein | FLACOL_02335 | Not Available | Positive | 2734064 - 2735482 | 54441.1 |
| heme a synthase | FLACOL_02336 | Not Available | Positive | 2735561 - 2736580 | 39312.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
