Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna n6-adenosine threonylcarbamoyltransferase | FLACOL_02307 | Not Available | Positive | 2702411 - 2703433 | 37337.2 |
| ribosomal rna small subunit methyltransferase e | FLACOL_02308 | Not Available | Positive | 2703482 - 2704186 | 26947.5 |
| hypothetical protein | FLACOL_02309 | Not Available | Positive | 2704300 - 2704953 | 25054.9 |
| trna (guanosine(18)-2'-o)-methyltransferase | FLACOL_02310 | Not Available | Positive | 2704958 - 2705467 | 18944.0 |
| pregnancy-associated plasma protein-a | FLACOL_02311 | Not Available | Positive | 2706533 - 2707573 | 38136.2 |
| ribosomal protein s12 methylthiotransferase rimo | FLACOL_02312 | Not Available | Negative | 2708025 - 2709326 | 49678.8 |
| outer membrane protein transport protein (ompp1/fadl/todx) | FLACOL_02313 | Not Available | Negative | 2709593 - 2711116 | 56711.6 |
| iga fc receptor precursor | FLACOL_02314 | Not Available | Negative | 2711180 - 2712175 | 38779.5 |
| proline--trna ligase | FLACOL_02315 | Not Available | Positive | 2712274 - 2713752 | 56067.9 |
| Trna-glu | Not Available | Not Available | Positive | 2713874 - 2713948 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
