Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-n-acetylglucosamine deacetylase | FLACOL_00182 | Not Available | Negative | 225183 - 225926 | 28761.1 |
| 3-oxoacyl-(acyl carrier protein) synthase ii | FLACOL_00183 | Not Available | Negative | 225920 - 226981 | 38854.1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 | FLACOL_00184 | Not Available | Negative | 226990 - 228183 | 42835.8 |
| acyl carrier protein | FLACOL_00185 | Not Available | Negative | 228296 - 228553 | 9412.35 |
| hypothetical protein | FLACOL_00186 | Not Available | Negative | 228557 - 229171 | 23422.8 |
| 3-oxoacyl-[acyl-carrier-protein] synthase 2 | FLACOL_00187 | Not Available | Negative | 229174 - 230289 | 39931.6 |
| acyl-coa thioester hydrolase ybgc | FLACOL_00188 | Not Available | Negative | 230291 - 230698 | 15464.3 |
| inner membrane transport permease ybhr | FLACOL_00189 | Not Available | Negative | 230715 - 231980 | 46236.4 |
| daunorubicin/doxorubicin resistance atp-binding protein drra | FLACOL_00190 | Not Available | Negative | 231988 - 232743 | 27666.5 |
| hypothetical protein | FLACOL_00191 | Not Available | Negative | 232747 - 233742 | 37294.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
