Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain-amino-acid aminotransferase 2 | FLACOL_02007 | Not Available | Positive | 2362929 - 2363996 | 39997.1 |
| hypothetical protein | FLACOL_02008 | Not Available | Negative | 2364250 - 2365368 | 43714.0 |
| hypothetical protein | FLACOL_02009 | Not Available | Negative | 2365384 - 2366451 | 40682.6 |
| hypothetical protein | FLACOL_02010 | Not Available | Positive | 2366539 - 2366880 | 13677.6 |
| bacterial membrane protein yfho | FLACOL_02011 | Not Available | Positive | 2367143 - 2369563 | 91082.2 |
| hypothetical protein | FLACOL_02012 | Not Available | Negative | 2369718 - 2369822 | 3899.86 |
| hypothetical protein | FLACOL_02013 | Not Available | Positive | 2369959 - 2371233 | 48585.1 |
| dna polymerase iii subunit tau | FLACOL_02014 | Not Available | Positive | 2372732 - 2373865 | 42439.3 |
| hypothetical protein | FLACOL_02015 | Not Available | Positive | 2374051 - 2374488 | 16971.5 |
| chaperone protein clpb 1 | FLACOL_02016 | Not Available | Positive | 2375226 - 2377829 | 97435.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
