Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Structural protein | FLACOL_01065 | Not Available | Negative | 1249713 - 1250681 | 36896.6 |
| Structural protein | FLACOL_01066 | Not Available | Negative | 1250681 - 1251274 | 22554.9 |
| Tail tape measure | FLACOL_01067 | Not Available | Negative | 1251274 - 1253097 | 66106.9 |
| hypothetical protein | FLACOL_01068 | Not Available | Negative | 1253300 - 1253836 | 20559.6 |
| Tail tube | FLACOL_01069 | Not Available | Negative | 1253901 - 1254317 | 15697.1 |
| Structural protein | FLACOL_01070 | Not Available | Negative | 1254317 - 1255492 | 42486.8 |
| hypothetical protein | FLACOL_01071 | Not Available | Negative | 1255489 - 1255968 | 17939.2 |
| Amidase | FLACOL_01072 | Not Available | Negative | 1255961 - 1256371 | 15559.8 |
| hypothetical protein | FLACOL_01073 | Not Available | Negative | 1256371 - 1256730 | 13452.7 |
| Structural protein | FLACOL_01074 | Not Available | Negative | 1256732 - 1257571 | 30791.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
