Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FLACOL_01817 | Not Available | Negative | 2132237 - 2132989 | 28546.7 |
| hypothetical protein | FLACOL_01818 | Not Available | Positive | 2133153 - 2133596 | 17006.4 |
| cytochrome c biogenesis protein ccsa | FLACOL_01819 | Not Available | Positive | 2133734 - 2136880 | 121062.0 |
| hypothetical protein | FLACOL_01820 | Not Available | Positive | 2136873 - 2137436 | 21345.8 |
| hydroperoxy fatty acid reductase gpx1 | FLACOL_01821 | Not Available | Positive | 2137643 - 2138257 | 23299.1 |
| beta-lactamase | FLACOL_01822 | Not Available | Negative | 2138275 - 2139354 | 40907.8 |
| hypothetical protein | FLACOL_01823 | Not Available | Negative | 2139669 - 2140157 | 19509.6 |
| putative oxidoreductase orf5 in fasciation locus | FLACOL_01824 | Not Available | Negative | 2140253 - 2141716 | 56595.8 |
| hypothetical protein | FLACOL_01825 | Not Available | Negative | 2142233 - 2142877 | 25462.7 |
| 2-(s)-hydroxypropyl-com dehydrogenase | FLACOL_01826 | Not Available | Negative | 2142884 - 2143582 | 24844.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
