Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide methionine sulfoxide reductase msra | FLACOL_01777 | Not Available | Positive | 2094846 - 2095394 | 20981.9 |
| hypothetical protein | FLACOL_01778 | Not Available | Positive | 2095418 - 2095777 | 13741.5 |
| hypothetical protein | FLACOL_01779 | Not Available | Negative | 2095980 - 2096597 | 22180.9 |
| phenylalanine--trna ligase beta subunit | FLACOL_01780 | Not Available | Positive | 2097311 - 2099731 | 89999.7 |
| hypothetical protein | FLACOL_01781 | Not Available | Negative | 2100168 - 2101280 | 43214.1 |
| fumarylacetoacetate (faa) hydrolase family protein | FLACOL_01782 | Not Available | Negative | 2101435 - 2102718 | 47604.6 |
| serine hydroxymethyltransferase | FLACOL_01783 | Not Available | Positive | 2102832 - 2104106 | 46591.0 |
| chorismate synthase | FLACOL_01784 | Not Available | Positive | 2104244 - 2105308 | 38472.9 |
| c4-dicarboxylate transport protein | FLACOL_01785 | Not Available | Positive | 2105312 - 2106571 | 45338.7 |
| hypothetical protein | FLACOL_01786 | Not Available | Positive | 2106665 - 2106784 | 4381.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
