Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xaa-pro aminopeptidase | FLACOL_00142 | Not Available | Negative | 183414 - 184706 | 49524.2 |
| cyclic nucleotide-binding domain protein | FLACOL_00143 | Not Available | Negative | 184814 - 185389 | 22602.3 |
| bnr/asp-box repeat protein | FLACOL_00144 | Not Available | Positive | 185478 - 188141 | 100314.0 |
| hypothetical protein | FLACOL_00145 | Not Available | Positive | 188295 - 189125 | 30736.5 |
| fumarate reductase flavoprotein subunit | FLACOL_00146 | Not Available | Positive | 189146 - 191155 | 74278.9 |
| hypothetical protein | FLACOL_00147 | Not Available | Positive | 191184 - 191558 | 14318.2 |
| fumarate reductase iron-sulfur subunit | FLACOL_00148 | Not Available | Positive | 191602 - 192363 | 27717.3 |
| disulfide bond reductase dsbh precursor | FLACOL_00149 | Not Available | Positive | 192454 - 192966 | 19383.3 |
| hypothetical protein | FLACOL_00150 | Not Available | Positive | 192994 - 193707 | 27928.9 |
| hypothetical protein | FLACOL_00151 | Not Available | Positive | 193729 - 194433 | 26669.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
