Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diadenosine hexaphosphate hydrolase | FLACOL_01627 | Not Available | Negative | 1928422 - 1929030 | 23852.7 |
| orotate phosphoribosyltransferase | FLACOL_01628 | Not Available | Positive | 1929038 - 1929685 | 24031.9 |
| hypothetical protein | FLACOL_01629 | Not Available | Positive | 1929703 - 1930095 | 14504.8 |
| dead-box atp-dependent rna helicase csha | FLACOL_01630 | Not Available | Positive | 1930381 - 1932204 | 68490.2 |
| pentapeptide repeats (8 copies) | FLACOL_01631 | Not Available | Positive | 1932851 - 1933420 | 22195.3 |
| oxygen-insensitive nad(p)h nitroreductase | FLACOL_01632 | Not Available | Negative | 1933534 - 1934193 | 25082.0 |
| putative hth-type transcriptional regulator yybr | FLACOL_01633 | Not Available | Positive | 1934241 - 1934609 | 14151.6 |
| lipoprotein-releasing system atp-binding protein lold | FLACOL_01634 | Not Available | Negative | 1934599 - 1935279 | 25949.6 |
| lipoprotein-releasing system transmembrane protein lole | FLACOL_01635 | Not Available | Negative | 1935276 - 1936532 | 46590.2 |
| macrolide export protein maca | FLACOL_01636 | Not Available | Negative | 1936532 - 1937614 | 41099.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
