Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium columnare |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oreochromis niloticus, Oncorhynchus mykiss, catfish |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | fish |
Gene Summary
Adenine Count
1127125 bp
Thymine Count
1130068 bp
Guanine Count
502099 bp
Cytosine Count
496213 bp
Genome Length
3255895 bp
Protein-coding Genes
2709 genes
Non-Coding Genes
77 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-splicing ligase rtcb | FLACOL_00122 | Not Available | Positive | 160790 - 162181 | 51315.2 |
| hypothetical protein | FLACOL_00123 | Not Available | Positive | 162190 - 162819 | 24945.0 |
| peptide chain release factor 2 | FLACOL_00124 | Not Available | Positive | 162804 - 163556 | 28047.5 |
| hypothetical protein | FLACOL_00125 | Not Available | Positive | 163601 - 164131 | 20643.0 |
| hth-type transcriptional regulator immr | FLACOL_00126 | Not Available | Positive | 164829 - 165173 | 12889.6 |
| hypothetical protein | FLACOL_00127 | Not Available | Negative | 165330 - 165656 | 13115.9 |
| hypothetical protein | FLACOL_00128 | Not Available | Negative | 165656 - 166375 | 26513.5 |
| tetratricopeptide repeat protein | FLACOL_00129 | Not Available | Negative | 166965 - 167519 | 21595.5 |
| hypothetical protein | FLACOL_00130 | Not Available | Negative | 167762 - 168271 | 20318.0 |
| hypothetical protein | FLACOL_00131 | Not Available | Negative | 168390 - 168851 | 18323.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Columnaris disease | Causes | PMC11025331 |
| Columnaris disease | Causes | PMC12087154 |
| Columnaris disease | Causes | PMC5395568 |
